sanger / limber

A config-driven LIMS built on Sequencescape, primarily for running library preparation pipelines in the laboratory
MIT License
4 stars 8 forks source link

[js] Update cytoscape 3.30.2 → 3.30.3 (patch) #2057

Open depfu[bot] opened 2 weeks ago

depfu[bot] commented 2 weeks ago

Here is everything you need to know about this update. Please take a good look at what changed and the test results before merging this pull request.

What changed?

✳️ cytoscape (3.30.2 → 3.30.3) · Repo

Commits

See the full diff on Github. The new version differs by 10 commits:


Depfu Status

Depfu will automatically keep this PR conflict-free, as long as you don't add any commits to this branch yourself. You can also trigger a rebase manually by commenting with @depfu rebase.

All Depfu comment commands
@​depfu rebase
Rebases against your default branch and redoes this update
@​depfu recreate
Recreates this PR, overwriting any edits that you've made to it
@​depfu merge
Merges this PR once your tests are passing and conflicts are resolved
@​depfu cancel merge
Cancels automatic merging of this PR
@​depfu close
Closes this PR and deletes the branch
@​depfu reopen
Restores the branch and reopens this PR (if it's closed)
@​depfu pause
Ignores all future updates for this dependency and closes this PR
@​depfu pause [minor|major]
Ignores all future minor/major updates for this dependency and closes this PR
@​depfu resume
Future versions of this dependency will create PRs again (leaves this PR as is)
codecov[bot] commented 2 weeks ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 78.21%. Comparing base (4a05005) to head (5c6ed14).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #2057 +/- ## ======================================== Coverage 78.21% 78.21% ======================================== Files 471 471 Lines 18226 18226 Branches 262 262 ======================================== Hits 14255 14255 Misses 3969 3969 Partials 2 2 ``` | [Flag](https://app.codecov.io/gh/sanger/limber/pull/2057/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | Coverage Δ | | |---|---|---| | [javascript](https://app.codecov.io/gh/sanger/limber/pull/2057/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `70.43% <ø> (ø)` | | | [pull_request](https://app.codecov.io/gh/sanger/limber/pull/2057/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `78.21% <ø> (+<0.01%)` | :arrow_up: | | [push](https://app.codecov.io/gh/sanger/limber/pull/2057/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `78.21% <ø> (ø)` | | | [ruby](https://app.codecov.io/gh/sanger/limber/pull/2057/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger) | `91.16% <ø> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sanger#carryforward-flags-in-the-pull-request-comment) to find out more.

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.

StephenHulme commented 1 week ago

This update breaks http://localhost:3001/pipelines with

pipeline-graph-brZGNYnl.js:3 Uncaught (in promise) Error: Can not create edge `b855145b-def4-4f6e-923f-ba28a9bb32bb` with nonexistant source `LRC PBMC Pools Input`
    at Pa (pipeline-graph-brZGNYnl.js:3:12507)
    at io.restore (pipeline-graph-brZGNYnl.js:13:28697)
    at new oh (pipeline-graph-brZGNYnl.js:13:25238)
    at EB.add (pipeline-graph-brZGNYnl.js:13:32958)
    at I (pipeline-graph-brZGNYnl.js:13:97641)
    at pipeline-graph-brZGNYnl.js:13:97980
    at x (pipeline-graph-brZGNYnl.js:13:97442)
    at new EB (pipeline-graph-brZGNYnl.js:13:97891)
    at ny (pipeline-graph-brZGNYnl.js:16:108228)
    at Object.w_n [as renderPipelines] (pipeline-graph-brZGNYnl.js:41:30563)

:(