sanjaynagi / AmpSeeker

A snakemake workflow for amplicon sequencing
https://sanjaynagi.github.io/AmpSeeker/
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bcl_output should be in results #122

Closed sanjaynagi closed 1 month ago

sanjaynagi commented 6 months ago

As much output should be in results/ as possible, as it means you can delete a single folder when you want to start fresh.

There are a couple times this doesn't happen in the current workflow.