Closed ChabbyTMD closed 1 year ago
Hey @ChabbyTMD, I've just pushed those minor changes back. I also renamed the private_webpage.smk
to jupyter-book.smk
, also removed the underscores to become hyphens in the other rule files, hope that's cool.
Yes this is fine by me.
To get around the CI error, ive added a line to the github action, which copies the docs/ directory into the .tests/ folder prior to running CI.
I wanted to avoid just copying it into the .tests/ folder generally, as it would increase the size of the directory and we would be duplicating code, and would need to keep doing that each time we edit the ampseeker-book.
@ChabbyTMD @eddUG Going to merge so I can add the coverage notebook.
Fantastic to have this first implementation of the jupyter-book.
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Added functionality to create jupyterbook webpage with alignment results.