Heatmap of reads per well

[sanjaynagi]

A script which after demultiplexing, counts reads per sample and makes a heatmap of reads per well of each input plate.

[sanjaynagi]

After demultiplexing some of this data is stored in Reports/demultiplex_stats.csv, however, we wont have this file if people use their own fastqs.

[sanjaynagi]

As well as demultiplexing statistics, we can also look at

Median Q scores Median insert length Adaptor contamination

[sanjaynagi]

Closing for now.