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sanjaynagi / AmpSeeker

A snakemake workflow for amplicon sequencing
https://sanjaynagi.github.io/AmpSeeker/
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Implement gatk #79

Closed sanjaynagi closed 1 year ago

sanjaynagi commented 1 year ago
sanjaynagi commented 1 year ago

Not clear actually if gatk is better than mpileup for amplicon seq, closing for now.