allow fastq path input in metadata

sanjaynagi / AmpSeeker

A state-of-the-art snakemake workflow for amplicon sequencing

https://sanjaynagi.github.io/AmpSeeker/

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Closed sanjaynagi closed 7 months ago

sanjaynagi commented 7 months ago

I have added functionality so that users can provide exact paths to fastq files in the metadata.tsv, under the fq1 and fq2 headings.

sanjaynagi commented 7 months ago

CI now tests fastq metadata input and auto fastq input

sanjaynagi commented 7 months ago

closes #92