add local db support for snpeff, update config names and restructure .smk rule files

sanjaynagi / rna-seq-pop

Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data

https://sanjaynagi.github.io/rna-seq-pop/

MIT License

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Closed sanjaynagi closed 3 weeks ago

sanjaynagi commented 1 month ago

Previously could only use downloaded databases. Involves a change to the config.yaml. Will close #98

Have also updated the config names as in #87

sanjaynagi commented 3 weeks ago

also addresses #97