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sanjaynagi / rna-seq-pop

Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
https://sanjaynagi.github.io/rna-seq-pop/
MIT License
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fix labels on read counts PCA #20

Closed sanjaynagi closed 3 years ago

sanjaynagi commented 3 years ago

... to be the treatment (i.e Kisumu) , as opposed to sample name

sanjaynagi commented 3 years ago

and also report the % variance explained

sanjaynagi commented 3 years ago

Actually, we still want it to be labelled with samples in case we need to remove a wierd one. I have redone the plot in ggplot for aesthetic reasons, and it now shows variance explained