make conda env yaml for each .smk file

sanjaynagi / rna-seq-pop

Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data

https://sanjaynagi.github.io/rna-seq-pop/

MIT License

18 stars 7 forks source link

make conda env yaml for each .smk file #3

Closed sanjaynagi closed 3 years ago

sanjaynagi commented 4 years ago

So that the software can be deployed with conda, we need to specify conda envs in workflow/envs/

sanjaynagi commented 3 years ago

This now should be complete, closing

sanjaynagi commented 3 years ago

I will add that this has been checked on one dataset so far and seems to work. Currently exact package versions are not specified, this needs to added.

sanjaynagi commented 3 years ago

exact package versions now added