Closed sanjaynagi closed 3 years ago
In order to ensure (somewhat) even running times of variant chunks, use Travis Colliers script which splits the genome based on coverage(?) in the bam index files
https://github.com/freebayes/freebayes/issues/465#issuecomment-766878658
this may be useful when it comes to the final region to call, which can sometimes take a lot longer than others.
I misunderstood - the aforementioned script is useful when needing to run on a SLURM/SGE cluster and needing to control resources
In order to ensure (somewhat) even running times of variant chunks, use Travis Colliers script which splits the genome based on coverage(?) in the bam index files
https://github.com/freebayes/freebayes/issues/465#issuecomment-766878658
this may be useful when it comes to the final region to call, which can sometimes take a lot longer than others.