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sanjaynagi
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rna-seq-pop
Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
https://sanjaynagi.github.io/rna-seq-pop/
MIT License
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new gsea implementation, hypergeo in python
#72
Closed
sanjaynagi
closed
1 year ago
sanjaynagi
commented
1 year ago
didnt like old R implementation using fgsea
implemented own hypergeometric function in python
removed KEGG support (overcomplicated)
GO terms only, from GAF file
sanjaynagi
commented
1 year ago
resolved #69