Open bhagesh-codebeast opened 2 years ago
Hi, While executing the FastViFi I encountered the following error:
chmod: cannot access '/home/output/tmp': No such file or directory
following is the command I execued:
python3 run_kraken_vifi_docker.py --input-file /mnt/bhagesh/7_fastvifi/FastViFi/input/barcode07/FAP28939_R1.fq \ --input-file-2 /mnt/bhagesh/7_fastvifi/FastViFi/input/barcode07/FAP28939_R2.fq \ --output-dir output \ --virus hpv \ --kraken-db-path /mnt/bhagesh/7_fastvifi/FastViFi/kraken_db/kraken_datasets/ \ --vifi-viral-ref-dir /mnt/bhagesh/7_fastvifi/FastViFi/ViFi/viral_data/hpv/ \ --vifi-human-ref-dir /mnt/bhagesh/7_fastvifi/FastViFi/ref/
Is there a quick fix through the parameters ?
Thank you.
Hi, While executing the FastViFi I encountered the following error:
following is the command I execued:
Is there a quick fix through the parameters ?
Thank you.