sarabjotanand / owltools

Automatically exported from code.google.com/p/owltools
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problem with xref tag #34

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
What steps will reproduce the problem?
1. load plant_ontology.obo as input
2. on "Advanced" tab, unchecked all options and selected only "OBO" as "Write 
Format"
3. used HermiT reasoner (default)

What is the expected output? What do you see instead?

The line in the header that reads:
treat-xrefs-as-genus-differntia: CL part_of NCBITaxon: 3193

was converted to: 
"property_value: "treat-xrefs-as-genus-differntia" "CL part_of NCBITaxon: 3193"

What version of the product are you using? On what operating system?

Not sure what version, but I downloaded it last week.
Using Mac OS X 10.6.8

Please provide any additional information below.

This extra text makes it so the file will not load in AmiGO.

Original issue reported on code.google.com by rlwalls2...@gmail.com on 2 Apr 2012 at 12:38

GoogleCodeExporter commented 9 years ago
There seems to be a spelling mistake in your tag, the correct spelling for this 
tag is:
'treat-xrefs-as-genus-differentia'

(You were missing an e in differentia)

Original comment by HDie...@lbl.gov on 2 Apr 2012 at 4:43

GoogleCodeExporter commented 9 years ago
Thanks for finding that! Glad it was so easy to solve. Guess I should check my 
gmail more often.

Original comment by rlwalls2...@gmail.com on 4 May 2012 at 12:21

GoogleCodeExporter commented 9 years ago

Original comment by HDie...@lbl.gov on 18 Sep 2012 at 10:25