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sarahet / RLM

Read level DNA methylation analysis of bisulfite converted sequencing data
BSD 3-Clause "New" or "Revised" License
18 stars 3 forks source link

For output of bwa-meth #1

Closed WRui closed 2 years ago

WRui commented 2 years ago

Whether RLM can also handle output of bwa-meth?

sarahet commented 2 years ago

Unfortunately RLM cannot handle bwa-meth output since it requires a tag such as the ZS tag (bisulfite strand information) being present in the BAM file which bwa-meth does not provide.