Kip Does ANOVA in R

[sarahtanja]

Hey Kip follow this tutorial to build out the ANOVA code for the 'rates' dataframe

https://statsandr.com/blog/anova-in-r/

[sarahtanja]

@KHowel remember to push this up to the repo

[sarahtanja]

Graphing in R resources: https://r-graph-gallery.com/ https://r-graph-gallery.com/boxplot.html

[sarahtanja]

use the rates.csv file , if you need an example I already did a quick anova in sarah-anova.qmd

one thing to note is the 0.01, 0.1, etc. is not a percent.. it's a concentration in mg/L of microplastic to seawater.

Can you go back to the google sheet and change the names of the treatments in the dropdown to reflect that?

P.S. naming conventions in R don't like the use of () characters because that's the code to call a function. Use only _ underscores. I'd suggest something like PPa_0.01

[KHowel]

I'm currently going through the ANOVA and fixing up the QAQC, but it's not saving properly. I did a commit and push and pull earlier, but don't think it showed up on the hub

[KHowel]

I'll fix the naming conventions right now

[sarahtanja]

ok, don't worry about the QAQC in the respirometry.qmd doc... I'm double checking that (and adding to it a bit to account for the background blanks)

Just work on your new ANOVA analysis with the rates.csv and making pretty boxplots

The beauty of R is you can build out your code, while I finish the QAQC... and when we get updated rates all you have to do is re-run the code you've made

If you're not pushing/puling try in the Terminal:

git status

git add .

git commit -a -m "your message here"

git pull

git push

put each command on it's own line and enter before moving on to the next one

[sarahtanja]

p.s. nice work! I see your ANOVA got pushed into the respirometry folder

[sarahtanja]

Keep it up!