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sararselitsky / FastPG

Fast phenograph, CyTOF
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Set seed in parallel louvain #23

Open LazDaria opened 1 year ago

LazDaria commented 1 year ago

Hello,

thank you for the great package! Is it possible to set an RNG seed for FastPG::fastCluster() to ensure reproducibility?

Thank you!

sararselitsky commented 1 year ago

Unfortunately, no, because of how the parallel Louvain works, it is impossible to set a seed.

On Wed, May 31, 2023 at 10:04 AM Daria150393 @.***> wrote:

Hello,

thank you for the great package! Is it possible to set a seed for clustering to ensure reproducibility?

Thank you!

— Reply to this email directly, view it on GitHub https://github.com/sararselitsky/FastPG/issues/23, or unsubscribe https://github.com/notifications/unsubscribe-auth/ACQD6T7CIFSWCCODZ3NNCH3XI5FWBANCNFSM6AAAAAAYVQTW3Q . You are receiving this because you are subscribed to this thread.Message ID: @.***>

LazDaria commented 1 year ago

Thanks a lot for the quick reply :)