search

sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
43 stars 2 forks source link

CM.7.1 (BA.2.3.20+S:F486S + S:K147E) + S:R403K 12 seqs Italy Spain France a lot of diversity #103

Closed FedeGueli closed 1 year ago

FedeGueli commented 1 year ago

Just found this weird CM.7 branch.

Query: G14500T, C26801T,G656A, G22770A

Samples: EPI_ISL_17390375, EPI_ISL_17615444, EPI_ISL_17619326, EPI_ISL_17677150

Tree: Schermata 2023-05-27 alle 08 53 33 https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice11_genome_26c4_11ec90.json?label=id:node_7094190

Defining: CM.7: > S:K147E (A22001G) > Orf1a:L16F (C311T),Orf1b:V345L (G14500T), C26801T >ORf1a:A131T (G656A),S:R403K (G22770A )

FedeGueli commented 1 year ago

Now the parental with S:K147E has been designated CM.7.1 and this counts 8 seqs.

FedeGueli commented 1 year ago

ALREADY found by @ryhisner https://github.com/sars-cov-2-variants/lineage-proposals/issues/37