sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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JN.1 with S:M1229I ( 34 Sequences, 5 countries, mainly Canada- 4 States) 5 seqs with S:T572I #1087

Closed FedeGueli closed 11 months ago

FedeGueli commented 12 months ago

JN.1 > S:M1229I (G25249T)

Gisaid query: G25249T,T27810C,T3565C

Samples: EPI_ISL_18486527, EPI_ISL_18492896, EPI_ISL_18496250, EPI_ISL_18501461, EPI_ISL_18504052, EPI_ISL_18505281, EPI_ISL_18505329, EPI_ISL_18505452

First sample collected in Puerto Rico on 20/10/2023

Countries : Canada (Alberta, Ontario, Saskatchewan), Puerto RIco, Belgium

Tree: Schermata 2023-11-16 alle 09 31 53 https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_2bd52_5d30f0.json?label=id:node_4439124

Query for the S:T572I branch : G25249T,T27810C,C23277T

FedeGueli commented 12 months ago

+2 Alberta

FedeGueli commented 11 months ago
FedeGueli commented 11 months ago

Now entered some long term care home. 23 now 5 countries.

FedeGueli commented 11 months ago

+2 Israel

Memorablea commented 11 months ago

JN.1.2 https://github.com/cov-lineages/pango-designation/commit/3a8e5905e6513c6f819bd4c66226e388dd5834b1

FedeGueli commented 11 months ago

Designated JN.1.2 via https://github.com/cov-lineages/pango-designation/commit/3a8e5905e6513c6f819bd4c66226e388dd5834b1