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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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From Malaysia/Indonesia S:N481Y on XBB.1.31 backbone 3seqs #114

Closed FedeGueli closed 1 year ago

FedeGueli commented 1 year ago

This will be nothing but better to track it.

Its composite fitness score is still high: Schermata 2023-05-30 alle 00 27 43

Schermata 2023-05-30 alle 00 27 01 https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_1e095_526910.json?label=id:node_6983430

XBB.1.31>> Orf1a:A1049V (C3411T) > C313T , A12103G, S:N481Y (A23003T), C27923T

Gisaid query : A12103G, A23003T,C313T, C27923T

Samples: 3 EPI_ISL_17681274, EPI_ISL_17696804, EPI_ISL_17719515,

Over-There-Is commented 1 year ago 
                 /organism="Severe acute respiratory syndrome coronavirus 2"
                 /mol_type="genomic RNA"
                 /isolate="SARS-CoV-2/human/CHN/SH-HG20230508-604/2023"
                 /isolation_source="Pharyngeal swab"
                 /host="Homo sapiens; Host_age: 33; Host_sex: Male"
                 /country="China:Shanghai"
                 /collection_date="2023-05-05"
                 /note="Passage_details/history: Original;
                 Additional_host_information: Patient infected while
                 traveling in Malaysia"
FedeGueli commented 1 year ago