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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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JD.1.1/Pango#2436 (= HK.13.1+S:Q14R) recombinant (15 seqs, 3 countries) #1257

Closed xz-keg closed 8 months ago

xz-keg commented 10 months ago

image

JD.1.1--Main page #2436(HK.13.1+S:Q14R)--JD.1.1

Breakpoint 1 between 6897 and 9692 Breakpoint 2 between 22987 and 25571

Additional mutations: C3828T, from a JD.1.1 branch Orf1a:S1188L

GISAID query: C6896T, C13378T, G22927C No. of seqs: 5(Canada 3 Germany 1 France 1)

First: EPI_ISL_18570187, Germany, 2023-11-13 Latest: EPI_ISL_18717389,France, 2023-12-11

usher

It is on the same recombinant island as main page #2422. image

FedeGueli commented 9 months ago

1 seq in. jan

FedeGueli commented 8 months ago

Last two samples from january are Canada, if it was circulating there we should have more than that, closing for now