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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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NY: XBB.1.5.106 saltation with S:F157S ,S:K202N, S:K304N and tot 16 AA ( 3 sequences) #1400

Closed FedeGueli closed 7 months ago

FedeGueli commented 8 months ago

I was tracking this saltation that apparently grew to 3

Defining mutations: XBB.1.5.106 (S:A623V) > Orf1a:V28I (G347A)> Orf1a:E937G (A3075G) > G1148A, Orf1a:K367T (A1365C) , Orf1a:N1081S (A3507G), Orf1a:S1218N (G3918A), Orf1a:L1368I (C4367A), C4456T, Orf1a:T1881I (C5907T), C6781T, Orf1a:H2794Y(C8645T), Orf1a:H2794Y (T10721C),C11173T C20178G, S:F157S (T22032C),S:K202N (A22168T), S:K304N (A22474C), T24028C, C25378T, orf3a:I35M (A25497G), M:I52T (T26677C), C26894T, A28266T, N:T135I (C28677T),C29272T, N:K361I (A29355T)

Screenshot 2024-02-26 alle 09 59 23

Query:A1365C, A3507G, G3918A

Samples : 3 EPI_ISL_18828912, EPI_ISL_18856190, EPI_ISL_18914858, tree:

Screenshot 2024-02-26 alle 09 58 52

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_809e_c4ce40.json?label=id:node_4036219

xz-keg commented 7 months ago

No further seqs.