GJ.1.2/JN.1.4 recombinant (6 seqs, 2 countries, 3 with S:R683Q)

sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages

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Closed aviczhl2 closed 5 months ago

aviczhl2 commented 6 months ago

One previous singlet gets company. Propose it. Seems to be the first XBB.2.3/BA.2.86 recomb.

GJ.1.2--JN.1.4

Breakpoint between 8394 and 9865.

Additional mutations: A13308G,C17134A, C29421T

Orf1a: K4348R Orf1b:P1223T N:P383L

A13308G,C17134A from a JN.1.4 branch C29421T is private mutation

GISAID query: T18453C, C7819G, C28958A No. of seqs: 2(South Korea) GISAID query for S:R683Q branch: G23610A, T18453C, C7819G

EPI_ISL_18924380, 2024-1-31 EPI_ISL_18948579, 2024-2-4 usher

aviczhl2 commented 6 months ago

It seems that there exists a new seq of this branch without S:R683Q. Edit proposal.

aviczhl2 commented 5 months ago

+1 Japan

aviczhl2 commented 5 months ago

No new seqs