XDS+Orf1a:T891I, S:S680F(9 seqs, 5 countries) - roughly 10% in Portugal in February.

sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages

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Closed aviczhl2 closed 5 months ago

aviczhl2 commented 6 months ago

This was in the original XDS proposal, and recently new seqs are added, make an issue. XDS+C2937T,A6994G, C23601T (Orf1a:T891I, S:S680F)

GISAID query: C2937T,A6994G, C23601T No. of seqs: 5(USA 2(from Portugal), Sweden 2 Germany 1)

First: EPI_ISL_18724545, Germany, 2023-12-7 Latest: EPI_ISL_18965332, USA from Portugal, 2024-2-27

aviczhl2 commented 6 months ago

+3 Portugal

FedeGueli commented 6 months ago

high prevalence in February: out of 41 samples labelled as from Portugal or travellers from Portugal 4 are from this lineage

aviczhl2 commented 6 months ago

+1 Canada

aviczhl2 commented 5 months ago

No new seqs