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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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JN.1.18+S:F59S (16 seqs, 10 countries) #1441

Closed aviczhl2 closed 5 months ago

aviczhl2 commented 6 months ago

My automated lineage detection tool reveals an S:F59S branch under JN.1.18, which is interesting as it shows convergence with JN.1.13.1.

JN.1.18+C4331T+T22321C+T21738C(S:F59S)

GISAID query: C4331T, T22321C,T21738C No. of seqs: 9(Singapore 1 Oman 1 USA 4(1 from Spain) France 1 UK 1 Sweden 1)

First: EPI_ISL_18879418, USA from Spain, 2024-1-27 Latest: EPI_ISL_18980882, USA, 2024-2-29

usher

image

FedeGueli commented 6 months ago

two more samples from a single traveller fro Qatar

aviczhl2 commented 5 months ago

+1 China

aviczhl2 commented 5 months ago

+2 USA from Hong Kong +1 Switzerland

FedeGueli commented 5 months ago

It seems growing fast even if slower than FLiRT

aviczhl2 commented 5 months ago

Designated JN.1.18.2 via https://github.com/cov-lineages/pango-designation/commit/388d260c2a7f2576223c92758a132012b52f4e5d