One more JN.1+S:F59S(99 seqs, 11 countries, 5 with S:R346T)

sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages

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One more JN.1+S:F59S(99 seqs, 11 countries, 5 with S:R346T) #1479

Closed aviczhl2 closed 4 weeks ago

aviczhl2 commented 5 months ago

JN.1+C25566T+C4570T,C6941T+T21738C(S:F59S)

GISAID query: T21738C, C4570T,C6941T No. of seqs: 22(China 21(Anhui, Henan, Heilongjiang, Fujian, Liaoning, Hubei) Denmark 1)

First: EPI_ISL_18857569, Heilongjiang, 2024-1-6 Latest: EPI_ISL_19013743, Hubei, 2024-3-20

6/158 of Heilongjiang seqs since 2024-2.

usher

aviczhl2 commented 5 months ago

Also in Shanxi

aviczhl2 commented 4 months ago

54, USA

FedeGueli commented 4 months ago

LEts wait a bit more to understand Dynamics in China once FLiRT hitting there. ( even if it could be that previous FLiP wave maybe crossprotects better than other kind of immunity )

FedeGueli commented 3 months ago

slowing down a lot

aviczhl2 commented 3 months ago

73, Spain

FedeGueli commented 3 months ago

+1 Thai

aviczhl2 commented 3 months ago

+1 Australia

aviczhl2 commented 2 months ago

87, Portugal, Netherlands

aviczhl2 commented 2 months ago

94, UK

FedeGueli commented 2 months ago

4 samples with S:R346T.

Am i wrong but 59X is a feature of lineages with 346T ?

aviczhl2 commented 2 months ago

4 samples with S:R346T.

Am i wrong but 59X is a feature of lineages with 346T ?

It can emerge independently.

FedeGueli commented 2 months ago

4 samples with S:R346T. Am i wrong but 59X is a feature of lineages with 346T ?

It can emerge independently.

I was meaning that it is beneficial especially when 346T is there

aviczhl2 commented 1 month ago

99, Ireland, South Korea

FedeGueli commented 1 month ago

Still no samples from July and few from June. lets wait a bit more before closing iit

FedeGueli commented 4 weeks ago

only one recent sample from July