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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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BN.1.3.5 mini-saltation(8 nuc/5 aa) in China (25 seqs) #15

Closed aviczhl2 closed 1 year ago

aviczhl2 commented 1 year ago

Migrated from https://github.com/cov-lineages/pango-designation/issues/1981 sub-lineage of: BN.1.3.5 mutations on top of BN.1.3.5: G4556A(orf1a:V1431I),G9753A(orf1a:R3163K),C17999T(orf1b:T1511I),G21785A(S:G75S), T25343C,C28102T(orf8:P70L),C28507T,T28588C

GISAID query: C28507T,T28588C,C28102T No. of seqs: 6(Zhejiang 3 Hebei 2 Singapore 1)

First seq: EPI_ISL_17490490(Hebei) 2023-3-17 Latest seq: EPI_ISL_17596232(Singapore) 2023-4-13

Sequences: EPI_ISL_17490383, EPI_ISL_17490490, EPI_ISL_17492813, EPI_ISL_17495314-17495315, EPI_ISL_17596232 usher

Screen Shot 2023-05-04 at 16 24 22

FedeGueli commented 1 year ago

2 new sequences came of this lineage from Hubei and Sichuan collected in May. Worth keeping this tracked, hard that it will compete but still very interesting.

aviczhl2 commented 1 year ago

2 more in Fujian.

aviczhl2 commented 1 year ago

1 more in Liaoning.

aviczhl2 commented 1 year ago

1 more from Beijing

aviczhl2 commented 1 year ago

4 more in Jiangxi

aviczhl2 commented 1 year ago

Shanxi uploads a batch of 7 of this.

FedeGueli commented 1 year ago

At this point better proposing it , the last batch doesnt contain very recent samples but we already know from other samples it was circulating still in June. So it is ok to propose it.

aviczhl2 commented 1 year ago

Original proposal reopened.