Open ryhisner opened 2 months ago
+3 GBW samples i think
19 please propose it
26 now with around 6% of prevalence in Iceland
This jumped to 41 probably due to a cluster from England
BIG JUMP TO 41 FROM ENGLAND propose it @ryhisner
50 now from 9 countries. it seems spreading in Uk Iceland Portorico and has been sampled from travelers coming from India and Singapore and in Hong Kong
propose it
101 , 15 countries, @ryhisner please propose it.
119 now , today six samples uploaded from Canada with S:R214L , likely just a cluster.
126 @ryhisner please propose it
132
142 Sweden
cc @ryhisner i would propose this one
Description Sub-lineage of: KP.2.3 (S:∆S31, H146Q, R346T, F456L, V1104L) Earliest sequence: 2024-5-14, USA, Utah — EPI_ISL_19175796 Most recent sequence: 2024-6-2, Singapore traveler to USA—EPI_ISL_19195862; New York City, USA—EPI_ISL_19189066 Continents circulating: Europe (3), Asia (3), North America (2) Countries circulating: Iceland (5), Ireland (2), Singapore (2), USA (2), India (1) Number of Sequences: 12 GISAID Nucleotide Query: G22706T, A9533G CovSpectrum Query: Nextcladepangolineage:KP.2* & G22706T & [1-of: A9533G, C29095T] Substitutions on top of KP.2.3: Spike: V382L ORF1a: I3090V Nucleotide: A9533G, G22706T, C29095T
USHER Tree https://nextstrain.org/fetch/genome-euro.ucsc.edu/trash/ct/subtreeAuspice1_genome_euro_31972a_c78810.json?label=id:node_2377461
Evidence Mainly of interest due to recency of collection, wide geographic spread, and the fact that one sequence is from a traveler from India.
Genomes
Genomes
EPI_ISL_19159306, EPI_ISL_19159313-19159314, EPI_ISL_19159318, EPI_ISL_19162365, EPI_ISL_19162491, EPI_ISL_19175796, EPI_ISL_19189066, EPI_ISL_19195199, EPI_ISL_19195626, EPI_ISL_19195862