KP.2 Plus S:I934V and S:N30K emerged in China (32 , 7 countries)

sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages

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KP.2 Plus S:I934V and S:N30K emerged in China (32 , 7 countries) #1699

Closed FedeGueli closed 4 days ago

FedeGueli commented 2 months ago

Defining mutations: KP.2 > Orf1a:P1803L (C5673T = PLPro_P240L) > C14220T > S:I934V (A24362G) > T931A, G8872A, S:N30K (T21652G) Query: T931A,C5673T,G8872A

Samples: 7 ( 6 on Gisaid) Countries: China 3, Hong Kong 2, Canada 1, NY 1 not on Gisaid Tree:

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_210f3_7c4540.json?label=id:node_7010897

Note that the three samples from Mainland China misses a lot of areas in the NTD so i think they have S:N30K too

FedeGueli commented 1 month ago

11 with 4 samples from HK and a new one from Japan

FedeGueli commented 1 month ago

not fast enough clsoing it

aviczhl2 commented 4 weeks ago

Two more of this branch from the 8-14 Hong Kong batch.

aviczhl2 commented 4 weeks ago

Also 1 more in the 8-14 Gansu batch.

FedeGueli commented 4 weeks ago

GThx reopened it.

FedeGueli commented 3 weeks ago

+1 Malaysia

FedeGueli commented 2 weeks ago

+2 , new country Australia (Vic)

aviczhl2 commented 1 week ago

+1 Denmark +4 Shanxi

I think this one shall be proposed.

FedeGueli commented 1 week ago

+1 Denmark +4 Shanxi

I think this one shall be proposed.

please propose it and the other you highlighted me some days ago. i cant propose them until monday

FedeGueli commented 4 days ago

now proposed here: https://github.com/cov-lineages/pango-designation/issues/2770