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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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LB.1.2+S:T572I( 34 seqs, 14 countries) likely emerged in South America #1792

Closed aviczhl2 closed 1 month ago

aviczhl2 commented 1 month ago

EDITED: Duplicate of #1732 where this branch was earlier misplaced as LB.1+FULL QUAD , keeping this open and the other to discuss if more unrelated branches are gathered there and to track the fullquad recombinant described there.

LB.1.2+C23277T(S:T572I)

GISAID query: G19669A, C23277T, G22111T No. of seqs: 18(Denmark 1 Ireland 1 Israel 2 Malaysia 1 Spain 1 USA 12(2 from Mexico, 2 from Netherlands, 3 from Peru, 1 from Guatemala)

Usher places this branch together with other LB.1+S:T572I branches (and wrongly proposed in #1732), however this shall be sub-branch of LB.1.2(G19669A) @AngieHinrichs

First: EPI_ISL_19205993, USA from Peru, 2024-6-7 Latest: EPI_ISL_19283124, Israel, 2024-7-14

usher image

FedeGueli commented 1 month ago

It is the one proposed in #1732 no need to open another issue.

FedeGueli commented 1 month ago

lets keep this open and the other for ddiscussing the branches and the recombinant.

FedeGueli commented 1 month ago

20 , new country Netherlands

aviczhl2 commented 1 month ago

27, Australia, Canada

FedeGueli commented 1 month ago

please propose this one

FedeGueli commented 1 month ago

34 Singapore propose it please

aviczhl2 commented 1 month ago

Usher now places it correctly. The Singapore seqs seem to be XDY+T572I, I'll alter query in main repo issue.

FedeGueli commented 1 month ago

Designated LB.1.2.2 via https://github.com/cov-lineages/pango-designation/commit/968a20bc7a6ecf26db18dc0cc4bcbc86a37f4659