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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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One more KP.3.1+S:S31F( 158 seqs, 14 countries) #1856

Closed xz-keg closed 3 months ago

xz-keg commented 3 months ago

Misplaced under KP.3.1.3 before so we didn't detect. Now there's enough seqs with G25644T only so usher gives it an independent branch @corneliusroemer KP.3.1+G25644T+C21654T(S:S31F)

GISAID query: G25644T,C21654T,G15372T No. of seqs: 158(Canary Islands 1 Denmark 4 UK 9 France 8 Germany 1 Ireland 1 Israel 1 Italy 1 Japan 2 Luxembourg 2 Netherlands 3 Norway 1 Puerto Rico 1 Spain 95 Sweden 4 USA 23(2 from France 1 from Italy 2 from Germany))

First: EPI_ISL_19108408, UK, 2024-4-25 Latest: EPI_ISL_19324871, Spain, 2024-8-1

usher image

FedeGueli commented 3 months ago

propose it directly is big enough to be designated

FedeGueli commented 3 months ago

G25644T

i would consider to make this KP.3.1.3 because KP.3.1.3. without it is only 18 with most of recent samples belonging to one single Irish cluster

ping @corneliusroemer

xz-keg commented 3 months ago

Proposed in the main repo as a lineage alter suggestion.