search

sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
43 stars 2 forks source link

LB.1.4 subbranch with S:A845S and Orf9b:P>S10F (19, US 16, CA 3) #1911

Closed Over-There-Is closed 1 month ago

Over-There-Is commented 1 month ago

LB.1.4> C14925T, C25603T> C27012T, C28312T(Orf9b:S10F)> G24095T(S:A845S) Query: G24095T, C27012T, C28312T

Earliest sequence: 05-25 San Francisco, California, USA EPI_ISL_19308389 Latest sequence: 08-07 Monterey, California, USA EPI_ISL_19352328 Regions Detected: US 16, Canada 3

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_3f5ff_955510.json?c=country&label=id:node_7258777 image

Sequences: EPI_ISL_19215589, EPI_ISL_19260236, EPI_ISL_19282133-19282134, EPI_ISL_19304572, EPI_ISL_19306379, EPI_ISL_19308389, EPI_ISL_19308531, EPI_ISL_19311167, EPI_ISL_19314168, EPI_ISL_19316708, EPI_ISL_19319402, EPI_ISL_19326028, EPI_ISL_19337983, EPI_ISL_19346259, EPI_ISL_19346647, EPI_ISL_19352311, EPI_ISL_19352324, EPI_ISL_19352328

FedeGueli commented 1 month ago

Orf9b:P10S is in all Omicron-s except BQ* and few other lineages that had F there

Over-There-Is commented 1 month ago

Orf9b:P10S is in all Omicron-s except BQ* and few other lineages that had F there

Typo, sorry

FedeGueli commented 1 month ago

Designated LB.1.4.3 via https://github.com/cov-lineages/pango-designation/commit/8536270805d19b8de746f004b6dfbbb59f08d330