sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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MC.1 subbranch with S:A942S (50 seqs, 12 countries) and further S:A626V(FR 6) #1932

Closed Over-There-Is closed 1 month ago

Over-There-Is commented 2 months ago

MC.1> C13297T> C14220T> G24386T(S:A942S)> C23439T(S:A626V) (edited typo) Query: C8293T, C13297T, G24386T

Earliest sequence: 07-16 California, US (from Serbia) EPI_ISL_19289846 Latest sequence: 08-17 Barcelona, Catalunya, Spain EPI_ISL_19361195 Regions detected: France 4, Spain 3, US 3(1 from Serbia), Canada 1, Germany 1

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_553_cc6a40.json?c=country&label=id:node_7053477 image

Sequences: EPI_ISL_19289846, EPI_ISL_19308141, EPI_ISL_19312018, EPI_ISL_19316977, EPI_ISL_19327643, EPI_ISL_19337445, EPI_ISL_19338901, EPI_ISL_19357447-19357448, EPI_ISL_19357491, EPI_ISL_19357504, EPI_ISL_19361195

Over-There-Is commented 2 months ago

The original proposal is duplicated with MC.13.1

Over-There-Is commented 2 months ago

Barcelona+1

FedeGueli commented 2 months ago

13 now new country Japan , it seems fast, btw there was a typo in the title it is S:A626V not S:A262V!

Over-There-Is commented 2 months ago

Ireland

FedeGueli commented 2 months ago

18, Sweden , 2 more for the interesting 626V branch still only sampled in France

Over-There-Is commented 1 month ago

UK+1

Over-There-Is commented 1 month ago

CA+2 FR+1

Over-There-Is commented 1 month ago

Denmark

xz-keg commented 1 month ago

44 seqs now

xz-keg commented 1 month ago

@FedeGueli I think this one shall be proposed

FedeGueli commented 1 month ago

@FedeGueli I think this one shall be proposed This represents around 10% of recent samples in South Australia @Over-There-Is please propose it

Over-There-Is commented 1 month ago

Designated MC.1.1 via https://github.com/cov-lineages/pango-designation/commit/81c3b2dea03e3b95901ec189c8694b58926c8783