KP.1.1.3 with S:F186L,S:V445R and S:Q493E (11 seqs - 6 countries including Philippines) with two branches: one with S:R190S (9) and the other with S:L176F+S:M153I (2)

FedeGueli commented 1 week ago

This was spotted first by @xz-keg in the groups and then tracked as Branch 30 of #1771 it is defined by three spike mutations 186L,445R and 493E The tree has now changed and it appears to be a lineage with two branches: one earlier tracked as Br.30 with S:R190S
and the bottom one with S:L176F and S:M153I Query for the whole branch: C22120A, 22896G, C23039G Query for S:R190S: C23039G,C4999T,G22132T,C25925T (by @aviczhl2 ) Query for S:L176F+S:M153I branch: C17822T, G22021C ,C22088T Samples: 4 Places: Israel, Germany, US, Philippines

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_3d8d6_3159c0.json?c=userOrOld&label=id:node_7286077

Originally posted by @FedeGueli in https://github.com/sars-cov-2-variants/lineage-proposals/issues/1771#issuecomment-2395621524

xz-keg commented 1 week ago

+3 Singapore for S:R190S branch

FedeGueli commented 4 days ago

+4 Singapore

xz-keg commented 2 days ago

+1 Canada-BC

FedeGueli commented 2 days ago

This appears more and more interesting

sars-cov-2-variants / lineage-proposals

KP.1.1.3 with S:F186L,S:V445R and S:Q493E (11 seqs - 6 countries including Philippines) with two branches: one with S:R190S (9) and the other with S:L176F+S:M153I (2) #2126