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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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MC.16 subbranch with ORF8:L7S, N:P6T and ORF9b:D2E(26 sequences, 6 regions) with a sub branch with S:E96G (9, US-NY) #2153

Open Over-There-Is opened 1 month ago

Over-There-Is commented 1 month ago

MC.16> G5665A, T27913C(Orf8:L7S), C28289A(N:P6T, Orf9b:D2E) Query: G2890A, G5665A, C28289A Query for S:E96G branch: G16207T, A21849G

Earliest sequence: 07-26 Puerto Rico, USA EPI_ISL_19390932 Latest sequence: 10-03 Onondaga, New York, USA EPI_ISL_19475728 Regions detected: US 19(Mainland 18, 1 from Austria, 1 not on GISAID; Puerto Rico 1), Canada 1, Germany 1

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_e382_c84df0.json?c=country&label=id:node_7205254 image

Sequences: EPI_ISL_19382386, EPI_ISL_19390932, EPI_ISL_19394406, EPI_ISL_19409444, EPI_ISL_19410198, EPI_ISL_19419863, EPI_ISL_19423806, EPI_ISL_19424054, EPI_ISL_19424220, EPI_ISL_19447075, EPI_ISL_19447317, EPI_ISL_19447351, EPI_ISL_19463827, EPI_ISL_19463906, EPI_ISL_19472814, EPI_ISL_19472874, EPI_ISL_19472926, EPI_ISL_19475663, EPI_ISL_19475693, EPI_ISL_19475728, PQ243022.1

FedeGueli commented 1 month ago

Sorry i didnt see this one, it looks like pretty a NY thing lets see.

FedeGueli commented 1 month ago

I ve added the S:E96G branch to the proposal.

FedeGueli commented 3 weeks ago

it seems dying

Over-There-Is commented 5 days ago

Luxembourg

FedeGueli commented 5 days ago

2 recent samples after one month reopening to track it a bit more