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sars-cov-2-variants / lineage-proposals

Repository to propose and discuss lineages
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XBB.1.16.2 with S:F456L (19, mainly Japan) #460

Closed FedeGueli closed 1 year ago

FedeGueli commented 1 year ago

Tree: Schermata 2023-07-23 alle 15 58 26 https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice2_genome_4a85_d31510.json?c=gt-S_456&label=id:node_6659765

Defining mutations: XBB.1.16.2 >>C25452T > S:F456L (T22928C)

Gisaid query: C25452T ,T22928C,G25429C

Samples : 15 First: hCoV-19/Japan/PG-544027/2023 | Original | EPI_ISL_17984697 | 2023-05-19 Last: hCoV-19/Japan/PG-545971/2023 | Original | EPI_ISL_17997032 | 2023-06-28 | 2023-07-18

Ids: EPI_ISL_17803904, EPI_ISL_17882864, EPI_ISL_17941060, EPI_ISL_17949176, EPI_ISL_17984697, EPI_ISL_17996944, EPI_ISL_17996951, EPI_ISL_17996957, EPI_ISL_17996981-17996982, EPI_ISL_17996992, EPI_ISL_17997008, EPI_ISL_17997032, EPI_ISL_17997057, EPI_ISL_17999325

Countries: Japan (14), Italy (1)

FedeGueli commented 1 year ago

+2

cc @corneliusroemer

FedeGueli commented 1 year ago

I transfer this one to the main page .

FedeGueli commented 1 year ago

Designated GY.8 via https://github.com/cov-lineages/pango-designation/commit/e200aa8c2983a2cfa5910bccf2fa71dd8f75e21e