Closed krosa1910 closed 1 year ago
Thank you @krosa1910 very good spot, i've edited slighty the proposal adding a more specific tree and a nuc query.
Grow to 4 seemingly, spread to Spain.
The latest 3 seem to form a branch with the mutation orf1a:V1143F=nsp3_V325F, and it is predicted to be positive and showed up in a weird long past mutant B.1.1.433, which created a temporary spread in Denmark back in 2020 winter.
thank you please propose it when it reaches 10
Spain and Scotland have some new updates. Also, the earliest Luxemburg sequence is excluded.
Better keeping it track here for a while. It didnt take off while it could and now it is likely too late.
Better keeping it track here for a while. It didnt take off while it could and now it is likely too late.
Agree, now it seem nowhere to compete with stronger variants like HK.3 or BA.2.86.1, I don't even mention JN.1. I guess DV.7.1 lost its window to gain more privilege position in Europe as a whole, and could only remain their as a "normal FLip". with low frequency, just like CH.1 in 2022 winter.
It did not be successful
Descendent of DV.7.1 (judged from flip+S:L858I +CH*) Mutations on top of that: C10228T ( small, 6 seq branch)+ T20833C, A29172T (N:H300L) C10615T, A22995G (S:K478R) Inquiry of this lineage:Spike_L455F,L858I,T478R
Nucleotides query: T4036A,C10228T,22995G,C19017T (edited again) Sequence 1/First is EPI_ISL_18107088 from Luxemburg in 23-07-10 Sequence 2/Second is EPI_ISL_18209326 from England in 23-08-12 Downsampled tree: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/singleSubtreeAuspice_genome_2d0a4_3efad0.json?f_userOrOld=uploaded%20sample DV.7.1 tree: (edited) https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_e8a5_42dff0.json?c=gt-S_478&label=id:node_7689922
It is rather rare that CH* got S:T478R mutation, and it is interesting when the second sequence is in a foreign country (although it's probably also because Luxemberg is so small)