UCSC compression tools do not work with subcommands

sartorlab / mint

A pipeline for the integration of DNA methylation and hydroxymethylation data

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Closed rcavalcante closed 8 years ago

rcavalcante commented 8 years ago

Need to change back to temp files, or do something else. Kind of annoying.

rcavalcante commented 8 years ago

Fixed in bisulfite comparison with aeed937a563a11689a94b4dedb1fde806333a72c

rcavalcante commented 8 years ago

Fixed in pulldown comparison with 2924f1fee4d4a45ba26116d9f891d341eedc5d4f

rcavalcante commented 8 years ago

Fixed in bisulfite alignment with a96999401e3521bbdfbdf87ce8679a4b306cb4be