satijalab / azimuth

A Shiny web app for mapping datasets using Seurat v4
https://satijalab.org/azimuth
GNU General Public License v3.0
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Inconsistencies in azimuth pbmc labels #139

Open mihem opened 1 year ago

mihem commented 1 year ago

A minor bug/inconsistency in the azimuth pbmc labels is that CD56bright NK cells are called NK_CD56bright in seu_object$predicted.celltype.l2 but NK-CD56bright in the feature names.

I like to create FeaturePlots of all variables in seu_object$predicted.celltype.l2, but this does not work for NK_CD56bright without manual reaming it.

So please consider renaming it. I think renaming borht to "NK CD56bright" would be most consistent with the other cell annotations, e.g. NK Proliferating"