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satijalab / azimuth

A Shiny web app for mapping datasets using Seurat v4
https://satijalab.org/azimuth
GNU General Public License v3.0
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Error in curl::curl_fetch_memory(url, handle = handle) #179

Closed Cathy94 closed 5 months ago

Cathy94 commented 1 year ago

I ran two samples successfully few days ago, but I met this now

Error in curl::curl_fetch_memory(url, handle = handle) : Timeout was reached: [seurat.nygenome.org] Operation timed out after 60000 milliseconds with 1269396 out of 3458249 bytes received

How could I solve this problem? Thank you.

mihem commented 1 year ago

Not a seurat team member, but also had this issue. I think this is a simple time out problem. If you juust google it, you get https://stackoverflow.com/questions/35282928/how-do-i-set-a-timeout-for-utilsdownload-file-in-r.

btw you open the same issue twice, so maybe close the other one.

Gesmira commented 5 months ago

@mihem's answer should fix the timeout issue. Closing now due to lack of response but feel free to reopen if the issue persists.