I am trying to run SCTransform on my Seurat object. I get this message and it begins running:
Calculating cell attributes from input UMI matrix: log_umi
Variance stabilizing transformation of count matrix of size 16080 by 5577
Model formula is y ~ log_umi
Get Negative Binomial regression parameters per gene
Using 2000 genes, 5000 cells
but I then get the following error:
Error in base::options(...future.oldOptions) : invalid argument
Can you please help me resolve this error? Thanks!
Hello,
I am trying to run SCTransform on my Seurat object. I get this message and it begins running: Calculating cell attributes from input UMI matrix: log_umi Variance stabilizing transformation of count matrix of size 16080 by 5577 Model formula is y ~ log_umi Get Negative Binomial regression parameters per gene Using 2000 genes, 5000 cells
but I then get the following error: Error in base::options(...future.oldOptions) : invalid argument
Can you please help me resolve this error? Thanks!