satijalab / seurat-data

Dataset distribution for Seurat
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Cannot install ifnb dataset - 3.1.0 404 error. Not present. #16

Closed kmshort closed 3 years ago

kmshort commented 4 years ago

I'm using SeuratData 0.2.1, R 3.6.2

> InstallData("ifnb") trying URL 'http://seurat.nygenome.org/src/contrib/ifnb.SeuratData_3.1.0.tar.gz' Error in download.file(url, destfile, method, mode = "wb", ...) : cannot open URL 'http://seurat.nygenome.org/src/contrib/ifnb.SeuratData_3.1.0.tar.gz' In addition: Warning message: In download.file(url, destfile, method, mode = "wb", ...) : cannot open URL 'http://seurat.nygenome.org/src/contrib/ifnb.SeuratData_3.1.0.tar.gz': HTTP status was '404 Not Found' Warning in download.packages(pkgs, destdir = tmpd, available = available, : download of package ‘ifnb.SeuratData’ failed Error in loadNamespace(name) : there is no package called ‘ifnb.SeuratData’

http://seurat.nygenome.org/src/contrib/ifnb.SeuratData_3.1.0.tar.gz isn't there. However, 3.0.0 still is: https://seurat.nygenome.org/src/contrib/ifnb.SeuratData_3.0.0.tar.gz

(I tried switching HTTP to HTTPS for 3.1, but there was no change). Can someone please check that the file is there and named correctly?

For now I've just installed ifnb 3.0.0 using install.packages, rather than InstallData("ifnb") which automatically tries to grab the non-existant ifnb 3.1 version.

andrewwbutler commented 3 years ago

Hi,

Sorry for the late reply. Are you still experiencing this error? I've checked and the 3.1.0 version should be available at that location.

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