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satijalab / seurat-data

Dataset distribution for Seurat
GNU General Public License v3.0
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How to install old release of SeuratData #89

Open LinZhang1004 opened 6 months ago

LinZhang1004 commented 6 months ago

Hello I tried to install SeuratData on our linux server. After running devtools::install_github('satijalab/seurat-data'), I was told that "namespace ‘SeuratObject’ 4.1.3 is already loaded, but >= 5.0.0 is required."

The server is being used by many people, and we don't want to upgrade the Seurat package from v4 to v5. Is it possible for us to install an old release of SeuratData which will be compatible with Seurat v4.1.3? Thank you!

LinZhang1004 commented 6 months ago

I found the solution. Thank you!

Korkenkaese commented 5 months ago

I found the solution. Thank you!

Could you share, Im having a similar problem, thank you :)

LinZhang1004 commented 5 months ago

@Korkenkaese Try this:

devtools::install_github("satijalab/seurat-data@v0.2.1")

karJac commented 2 months ago

Could you guys please make available as tag the latest version of SeuratData which works with Seurat4? version 0.2.1 is quite old as it comes from 2019

vdsukhov commented 1 month ago

Agree with @karJac. It would be really helpful to have a tag for the compatible version of Seurat-Data for Seurat V4. That way, users can easily find the right version they need.