Not able to convert loom to seurat

satijalab / seurat-wrappers

Community-provided extensions to Seurat

GNU General Public License v3.0

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Not able to convert loom to seurat #172

Open millerkaplanlab opened 8 months ago

millerkaplanlab commented 8 months ago

Hello. I used velocyto to generate the loom file required to RNA Velocity using seurat wrappers. I am unable to convert the loom object to Seurat as shown in the tutorial. I get the following error. Any help would be appreciated.

P7loom <- as.Seurat(x = loom.data) | | 0%Error in validObject(.Object) : invalid class “LogMap” object: Duplicate rownames not allowed

FlyingFa commented 7 months ago

Similar problem, did you figure out ?

jcy258 commented 7 months ago

Same problem!

jwtobias commented 3 months ago

Please add me to the list. Same function, same error.

TaoBern commented 2 months ago

same as me , does anyone solve it?