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satijalab / seurat

R toolkit for single cell genomics
http://www.satijalab.org/seurat
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Vignette "Using BPCells with Seurat Objects" outdated for function saveRDS() #7949

Closed InternetExplorerBoy closed 1 year ago

InternetExplorerBoy commented 1 year ago

Dear Seurat team, I am using the beta version of Seurat v5 and noticed that the newly added function parameter destdir in saveRDS() (which previously worked without an issue), doesn't work anymore and throws me the following error:

Error in saveRDS(object = scdata, file = ..., : unused argument (destdir = ...`

It seems that the function saveRDS() was replaced by SeuratObject::SaveSeuratRds() (but the behavior is not the same anymore, see #7948 ). The documentation, however, wasn't updated yet.

zskylarli commented 1 year ago

Hi - thank you for pointing this out! We are planning to release updated vignettes when Seurat v5 is released on CRAN.