I am trying to load a umi count matrix to build a seurat object but the problem is that in this count matrix which is seemingly is in a flat file format both the cell ids and gene ids are in rows (So there are 3 columns, one with cell IDs, one with gene IDs and one contains the counts). I attached a screenshot here.
I am trying for a long time now but I stuck.
I was wondering if you could kindly help me with that, or there isn't any function in seurat package for it.
Hi,
I am trying to load a umi count matrix to build a seurat object but the problem is that in this count matrix which is seemingly is in a flat file format both the cell ids and gene ids are in rows (So there are 3 columns, one with cell IDs, one with gene IDs and one contains the counts). I attached a screenshot here.
I am trying for a long time now but I stuck.
I was wondering if you could kindly help me with that, or there isn't any function in seurat package for it.
Many thanks for your time!