Unable to load visium HD data using seurat

satijalab / seurat

R toolkit for single cell genomics

http://www.satijalab.org/seurat

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Unable to load visium HD data using seurat #9394

Open Yijia-Jiang opened 5 days ago

Yijia-Jiang commented 5 days ago

Hello, I am trying to load visium HD data using the following command:

Load10X_Spatial(data.dir = localdir, filename="filtered_feature_bc_matrix.h5")

However, my r session is killed. The size of matrix is about 300MB, which should not incur killed session. Did I do anything wrong for loading the data?

joan-yanqiong commented 18 hours ago

what is the value of localdir?