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sba1 / ontologizer

Ontologizer is a tool for identifying enriched Gene Ontology terms in lists of names of genes or gene products.
http://ontologizer.de
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Gene names from enrichmed GO term #12

Open akesarwani opened 6 years ago

akesarwani commented 6 years ago

I ran MGSA from Ontologizer and got the list of enriched terms. However, I am also interested in gene names that are associated with the enriched terms. Is there any way to retrieve this information.

sba1 commented 6 years ago

I think that you can use the --annotation option (or short -n) to specify a further file that will contain the annotations. I have not checked it though whether it is the direction that you are interested in (e.g., whether terms -> genes, or genes -> terms).