search

sbalci / ClinicoPathJamoviModule

ClinicoPath jamovi Module
https://www.serdarbalci.com/ClinicoPathJamoviModule
GNU General Public License v2.0
15 stars 2 forks source link

gifs describing functions #8

Closed sbalci closed 4 years ago

sbalci commented 4 years ago

https://twitter.com/serdarbalci/status/1261256107919642629

https://twitter.com/serdarbalci/status/1261639212664840192

https://twitter.com/serdarbalci/status/1262083972328230912

https://twitter.com/serdarbalci/status/1262354990787694599

sbalci commented 4 years ago

https://twitter.com/serdarbalci/status/1262691784574017536

sbalci commented 4 years ago

https://www.youtube.com/watch?v=m3uInetiC8w

https://twitter.com/serdarbalci/status/1263191858454413312

sbalci commented 4 years ago

Some examples of survival analysis via @jamovistats #ClinicoPath module. Using #rstats #finalfit by @ewenharrison #survival #survminer #ggstatsplot in #jamovi

biostatistics #pathology #pathologists

https://www.youtube.com/watch?v=gIPf4xIKAOU

https://www.linkedin.com/pulse/survival-analysis-via-jamovi-clinicopath-module-serdar-balc%25C4%25B1 #datavisualisation #datascience #patoloji #analysis #datascientist #data #clinicaltrials #clinicalstudies #clinicaltrial #clinicalresearch

https://twitter.com/serdarbalci/status/1264153665386004480

It is generating natural language summaries to make easy to read the tables: "Median Survival: When LVI is Absent, median survival is 26 [20.1 - 32.3,”95% CI] months. When LVI is Present, median survival is 9.3 [8.8 - 10.6, 95% CI] months."

https://twitter.com/serdarbalci/status/1264153686508478465

“Hazard: When LVI is Present, there is 2.55 (1.85-3.51, p<0.001) times risk than when LVI is Absent.”

https://twitter.com/serdarbalci/status/1264153695715053568

"1, 3, 5-yr Survival: When LVI Absent, 12 month survival is 70.9% [63.36%-79.3%, 95% CI]. When LVI Absent, 24 month survival is 54.2% [45.85%-64.1%, When LVI Present, 12 month survival is 28.4% [20.03%-40.3%, 95% CI]. When LVI Present, 24 month survival is 14.4% …”

https://twitter.com/serdarbalci/status/1264153698764312577

"pairwise comparison of Grade: The comparison between Grade 2 and Grade 1 has a p-value of 0.87." Note for myself: The wording should be better.

https://twitter.com/serdarbalci/status/1264153700114862080

You can do multivariate survival analysis

https://twitter.com/serdarbalci/status/1264153711087140864

And also make Odds Ratio Tables and Plots. When you change the order of variables in jamovi data, the analysis also changes.

https://twitter.com/serdarbalci/status/1264153752015122432

https://www.youtube.com/embed/videoseries?list=PLxRBOaoEoP4JfAMi7aIbkRXPXGUEwzTNv

sbalci commented 4 years ago

Using @itschekkers #rstats formula https://github.com/achekroud/nomogrammer I have added Fagan's nomogram to @jamovistats medical decision module. https://twitter.com/serdarbalci/status/1293571439430377474?s=20

sbalci commented 4 years ago

I think this https://nbarrowman.github.io/vtree #rstats {vtree} Packagepackage is nice to quickly see the subgroups in a dataset. From a WIP @jamovistats module. https://twitter.com/serdarbalci/status/1297253680740282369?s=20

https://twitter.com/serdarbalci/status/1297255487717675014

sbalci commented 4 years ago

I have added options of #rstats {vtree} to @jamovistats module and so far it seems good :) https://twitter.com/serdarbalci/status/1298287234970517504