variant-bearing-reads.py should filter by actual variant conent, not CIGAR

sbg / Mitty

Seven Bridges Genomics aligner/caller debugging and analysis tools

Apache License 2.0

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variant-bearing-reads.py should filter by actual variant conent, not CIGAR #3

Closed ghost closed 7 years ago

ghost commented 7 years ago

Hi Caner! The program variant-bearing-reads should check for the truth data (as found in the qname) to check what variants are present, not the aligned CIGAR. Thanks!