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sbg / Mitty

Seven Bridges Genomics aligner/caller debugging and analysis tools
Apache License 2.0
13 stars 2 forks source link

variant-bearing-reads should have command line option for inclusion criterion #4

Closed ghost closed 7 years ago

ghost commented 7 years ago

Please add a command line switch that allows us to either keep just the reference reads, or just the variant bearing reads from the original BAM. Thanks!